Understanding the Lyophilisation Process and Its Effects on Peptides

Understanding the Lyophilisation Process and Its Effects on Peptides

Disclaimer: This article is for educational purposes only. All products supplied by Imperial Peptides UK are strictly for Research Use Only (RUO) and not for human or veterinary use.


Introduction

Lyophilisation - commonly known as freeze-drying - is the standard method used to stabilise research peptides for storage and transport. Without it, most peptides would degrade rapidly due to moisture, oxidation, and temperature fluctuation.

Peptides such as GHK-Cu (glycyl-L-histidyl-L-lysine copper complex) are typically supplied in lyophilised form because this significantly improves shelf life and structural stability.

However, researchers often ask:

  • Why do some peptide pucks look different from others?

  • Why is one vial’s cake loose while another is stuck to the bottom?

  • Does colour variation mean degradation?

This guide explains the process clearly and outlines what researchers should expect.

What Is Lyophilisation? (Simple Explanation)

Lyophilisation is a controlled dehydration process that removes water from a frozen solution using vacuum pressure.

It occurs in three stages:

1️⃣ Freezing

The peptide solution is rapidly frozen. Water turns into ice crystals within the solution.

2️⃣ Primary Drying (Sublimation)

Under vacuum, the ice converts directly from solid to vapour, removing most of the water.

3️⃣ Secondary Drying

Residual moisture is removed to produce a stable, dry peptide cake.

The result is a porous, dry solid - often referred to as a “puck” or “cake.”

Why Lyophilisation Is Used for Peptides

Peptides are sensitive to:

  • Hydrolysis (water-driven breakdown)

  • Oxidation

  • Microbial growth

  • Temperature instability

Removing water dramatically slows degradation.

Why Some Peptide Pucks Move and Others Stay Stuck?

One of the most common concerns is:

“One vial moves freely when shaken, but another stays stuck to the bottom. Is something wrong?”

In most cases, this is completely normal.

The way a lyophilised cake behaves depends on:

✔ Freezing Rate

Faster freezing creates different ice crystal structures, which influence cake texture.

✔ Fill Volume

Small differences in liquid volume affect how the cake forms and contracts.

✔ Vacuum Pressure & Drying Time

Minor variations in the lyophilisation cycle can affect density.

✔ Surface Adhesion

Some cakes adhere more firmly to the glass due to how they shrink during drying.

As a result:

  • Some pucks will move freely inside the vial

  • Some will appear firmly attached to the bottom or sides

  • Some may look slightly shrunken or lifted

These physical differences do not automatically indicate degradation or quality issues.

Colour Variation in GHK-Cu

GHK-Cu naturally appears blue due to the copper complex. During freeze-drying:

  • Slight shade differences may occur

  • Some vials may appear darker or lighter

  • Minor surface variation may be visible

This can be influenced by:

  • Oxidation exposure during processing

  • Density of the cake

  • Light reflection on the porous structure

Small variations in colour are common in copper-binding peptides and do not, on their own, indicate impurity.

When Should Researchers Be Concerned?

Normal variation includes:

✔ Slight colour differences
✔ Moving vs stuck pucks
✔ Minor shrinkage
✔ Texture variation

However, contact support if you observe:

  • Visible moisture inside the vial

  • Wet or partially dissolved material

  • Severe discolouration beyond normal variation

  • Damaged stoppers or cracked vials

Moisture is the true threat — not puck movement.

Why Post-Lyophilisation Testing Matters

Because freeze-drying can influence:

  • Moisture levels

  • Oxidation state

  • Impurity profiles

Each batch should undergo full quality testing after production.

At Imperial Peptides UK, all batches are tested for:

✔ Identity confirmation
✔ HPLC purity
✔ Heavy metal screening (ICP-MS)
✔ Endotoxin testing (LAL)

This ensures that physical appearance differences do not affect research reliability.

Best Practices After Receiving Lyophilised Peptides

To maintain stability:

  • Store at –20°C for long-term storage

  • Allow vial to reach room temperature before opening

  • Avoid exposing to humidity

  • Reconstitute with appropriate sterile solvent

  • Avoid repeated freeze-thaw cycles

Conclusion

Lyophilisation is a highly effective stabilisation process that protects peptides from moisture-driven degradation. Variations in cake appearance - including whether a puck moves freely or remains stuck to the vial - are normal outcomes of the freeze-drying process.

What truly determines research integrity is proper testing, moisture control, and responsible storage.

Imperial Peptides UK remains committed to supplying fully tested, RUO-grade peptides that maintain stability from production through laboratory use.